Computational Biology and Bioinformatics
Chronic obstructive pulmonary disease (COPD) is a chronic inflammatory lung disease that obstructs airflow and causes difficulty breathing. It is responsible for approximately 3.2 million de…
Computational Biology and Bioinformatics
Metabolism forms the foundation of understanding how cellular processes work; however, not all reactions within a metabolic network are fully understood. Some specific metabolic pathways in…
Computational Biology and Bioinformatics
Pulmonary fibrosis occurs when lung tissue becomes damaged or scarred and can be progressive in nature, impacting an individual’s ability to breathe. Idiopathic pulmonary fibrosis (IPF) and…
Computational Biology and Bioinformatics
With a prevalence of 2-8% of the world population, the insidious disease Fibromyalgia(FM) posses a threat. Fibromyalgia is a chronic-pain disorder characterized by widespread musculoskeletal…
Computational Biology and Bioinformatics
Fourth Award
Cardiovascular disease (CVD) is the leading cause of human death, accounting for 17.8 million deaths in the past year. CVD causes dysfunction in blood proteins and cells. These dysfunctions…
Computational Biology and Bioinformatics
Acute Kidney Injury (AKI) is a major clinical complication with an incidence of 50% among critical care patients and an observed in-hospital mortality of 62%. The early identification of pat…
Computational Biology and Bioinformatics
The early division of nuclei in a Drosophila embryo is composed of eight nuclear divisions, or cycles, producing a total of 256 nuclei by the eighth cycle. The nuclei start in the center of…
Computational Biology and Bioinformatics
Second Award
Breast Cancer (BC) is the most commonly diagnosed cancer and is a significant cause of death worldwide, affecting around 2.3 million women annually. Triple-negative breast cancer (TNBC) is a…
Computational Biology and Bioinformatics
In past work, invasive implants that implement a process called deep brain stimulation (DBS) in order to regenerate sight for the visually impaired have been investigated. DBS is a surgical…
Computational Biology and Bioinformatics
Colorectal cancer (CRC) has multiple subtypes, and it may take patients weeks to find out which subtype they have. The goal of this research is to use gene expression data to determine poten…
Computational Biology and Bioinformatics
Hepatocyte growth factor receptor (HGFR or c-MET) is a receptor tyrosine kinase that has been found to be linked to cancer, with malignant mutations causing tumor growth, angiogenesis, and m…
Computational Biology and Bioinformatics
Hi-C, a chromosome conformation capture-based method, allows researchers to interrogate chromatin interactions between any two genomic loci in a bulk of cells and study the spatial arrangeme…
Computational Biology and Bioinformatics
Third Award
Microbial DNA is a novel analyte for early cancer detection. Although recent studies have found distinct communities of bacteria and fungi between tumor types, they have not investigated mic…
Computational Biology and Bioinformatics
The inefficient treatment of thousands of diseases contributes to the need for a quick and cost-efficient alternative to current drug discovery methods. Drug development is extremely time-co…
Computational Biology and Bioinformatics
Eye diseases can potentially cause blindness in patients. Cataracts are the leading cause of blindness, accounting for over 51% of blindness worldwide. Glaucoma and diabetic retinopathy foll…
Computational Biology and Bioinformatics
Have you ever wondered where your fingerprints come from? The purpose of this project was to determine if fingerprints are genetically inherited through biological factors or relations and o…
Computational Biology and Bioinformatics
The aim of this work is to create a program capable of simulating the evolution of organisms together with geological processes. For simplicity, I have focused on the evolution of prokaryote…
Computational Biology and Bioinformatics
There are ethnic differences in c-reactive protein and another on how the gene APOL1 can affect millions of African Americans. Genetic ancestry and socioeconomic conditions are factors to wh…
Computational Biology and Bioinformatics
Fourth Award
Drug discovery, a complex and time-consuming process, heavily relies on determining affinities between drugs and targets. With the introduction of computational methods, researchers can now…
Computational Biology and Bioinformatics
One in twenty-six people worldwide develops epilepsy during their lifetime, including myself. Around 30% of epilepsy patients are nonresponsive to medication. It is important to identify the…
Computational Biology and Bioinformatics
miRNAs are small, non-coding RNAs significant in numerous biological processes and disease pathways, proven heavily dysregulated in cancers, with prior literature revealing their potential a…
Computational Biology and Bioinformatics
Fourth Award
West Nile virus (WNV) is the most impactful mosquito-borne disease in the United States. Since 1999, it has caused over 2,500 deaths and has seriously harmed quality of life for thousands of…
Computational Biology and Bioinformatics
Second Award
Neural networks are fundamentally flawed. In even the most trivial tasks like digit recognition, they require tens of thousands of training examples to achieve near-human accuracy. In contra…
Computational Biology and Bioinformatics
Fourth Award
A key drawback of traditional chemotherapy drugs like cisplatin is that they target both healthy and cancerous cells and are highly toxic in high or medium doses. The Warburg Effect states t…
Computational Biology and Bioinformatics
Rare, aggressive pediatric brain tumor ETMR is frequently misdiagnosed, reducing chances of survival. Early diagnosis is crucial due to its short average 12 month prognosis. While ETMR is ch…
Computational Biology and Bioinformatics
Every single cell in an organism has a membrane that, in addition to being a compartmental barrier, plays a role in maintaining cell shape and function. For example, sickle cell anemia is a…
Computational Biology and Bioinformatics
Fourth Award
Purpose: Liver cancer (Hepatocellular carcinoma) is one of the most common and fatal cancers. Subtypes associated with poor outcomes need proper characterisation. “Macrotrabecular-massive He…
Computational Biology and Bioinformatics
Alzheimer’s disease (AD) is the most prevalent neurodegenerative disease worldwide, but disease-modifying treatments are still lacking. Poly (ADP-ribose) polymerases (PARPs) consume nicotina…
Computational Biology and Bioinformatics
Computer modeling allows for simulating unknown events of the past and the future. Since specific details about the evolutionary process are unknown, I created a model to analyze predator an…
Computational Biology and Bioinformatics
First Award
Replication errors represent two-thirds of cancer mutations. A novel subset, micro-changing short tandem repeats (mcSTRs), lack systematic examination in cancers due to complex chromosomal a…